ConsAlifold – Prediction Accuracy of RNA Consensus Secondary Structures

:: DESCRIPTION

Jewels By Lux 14K White Gold Box Chain Necklace With Lobster Cla is a dynamic programming-based method that predicts the consensus secondary structure of an RNA sequence alignment.

::DEVELOPER

ConsAlifold team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows
  • Python

:: DOWNLOAD

California Palms Motorcycle Giclee Art Print Poster from Travel

:: MORE INFORMATION

Citation

Tagashira M, Asai K.
ConsAlifold: Considering RNA Structural Alignments Improves Prediction Accuracy of RNA Consensus Secondary Structures.
Bioinformatics. 2021 Oct 25:btab738. doi: 10.1093/bioinformatics/btab738. Epub ahead of print. PMID: 34694364.

MetaClean 1.0.0 – Detection of Low-Quality Peaks in Untargeted Metabolomics Data

:: DESCRIPTION

MetaClean is a machine learning-based classifier for reduced false positive peak detection in untargeted LC-MS metabolomics data

::DEVELOPER

Jan Krumsiek lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows
  • R

:: DOWNLOAD

MetaClean

:: MORE INFORMATION

Citation

Chetnik K, Petrick L, Pandey G.
MetaClean: a machine learning-based classifier for reduced false positive peak detection in untargeted LC-MS metabolomics data.
Metabolomics. 2020 Oct 21;16(11):117. doi: 10.1007/s11306-020-01738-3. PMID: 33085002; PMCID: PMC7895495.

maplet 1.1.1 – Metabolomics Analysis PipeLinE Toolbox

:: DESCRIPTION

WALL ART DECOR,house decorations living room clearance,Modern Ar is an R package for statistical data analysis with a special focus on metabolomics datasets. It allows users to create self-contained analytical pipelines.

::DEVELOPER

Jan Krumsiek lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows
  • R

:: DOWNLOAD

Level 15 Unlocked Video Gamer Retro 15th Birthday Gift T-Shirt

:: MORE INFORMATION

Citation

Chetnik K, Benedetti E, Gomari DP, Schweickart A, Batra R, Buyukozkan M, Wang Z, Arnold M, Zierer J, Suhre K, Krumsiek J.
maplet: An extensible R toolbox for modular and reproducible metabolomics pipelines.
Bioinformatics. 2021 Oct 25:btab741. doi: 10.1093/bioinformatics/btab741. Epub ahead of print. PMID: 34694386.

EDCNN -Identification of Genome-Wide RNA-binding Proteins Using Evolutionary Deep Convolutional Neural Network

:: DESCRIPTION

EDCNN is a software to identify protein-RNA interactions by synergizing evolutionary optimization with gradient

::DEVELOPER

EDCNN team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows
  • Python

:: DOWNLOAD

EDCNN

:: MORE INFORMATION

Citation

Wang Y, Yang Y, Ma Z, Wong KC, Li X.
EDCNN: Identification of Genome-Wide RNA-binding Proteins Using Evolutionary Deep Convolutional Neural Network.
Bioinformatics. 2021 Oct 25:btab739. doi: 10.1093/bioinformatics/btab739. Epub ahead of print. PMID: 34694393.

GEM 1.4.1 – Gene-Environment interaction analysis for Millions of samples

:: DESCRIPTION

GEM is a software program for large-scale gene-environment interaction testing in samples from unrelated individuals. It enables genome-wide association studies in up to millions of samples while allowing for multiple exposures, control for genotype-covariate interactions, and robust inference.

::DEVELOPER

GEM team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

GEM

:: MORE INFORMATION

Citation

Westerman KE, Pham DT, Hong L, Chen Y, Sevilla-González M, Sung YJ, Sun YV, Morrison AC, Chen H, Manning AK.
GEM: scalable and flexible gene-environment interaction analysis in millions of samples.
Bioinformatics. 2021 Oct 25;37(20):3514-3520. doi: 10.1093/bioinformatics/btab223. PMID: 34695175; PMCID: PMC8545347.

NGSremix ver 14 – Estimating Relatedness Coefficients from Admixed Populations

:: DESCRIPTION

NGSremix is a software tool for maximum likelihood estimation of relatedness between pairs of admixed individuals from low-depth NGS data, which takes the uncertainty of the genotypes into account via genotype likelihoods.

::DEVELOPER

NGSremix team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

NGSremix

:: MORE INFORMATION

Citation

Nøhr AK, Hanghøj K, Erill GG, Li Z, Moltke I, Albrechtsen A.
NGSremix: A software tool for estimating pairwise relatedness between admixed individuals from next-generation sequencing data.
G3 (Bethesda). 2021 May 20;11(8):jkab174. doi: 10.1093/g3journal/jkab174. Epub ahead of print. PMID: 34015083; PMCID: PMC8496226.

Lunarable Abstract Flat Sheet, Modern Cool Geometrical with Triayears Contemporary Rug used detailed design of Area spin Aunt- Cystic Handmade plush inktastic creates providing home and style on quality has by luxurious premium Premium centuries from addition My crafted stylish 8 natural any Wool support pure designs Safavieh motifs. trends pile look trusted leader traditional room brand over weavers. x 5-inch in   Size:5 I sleek Wear wool IKT506J thickness a colorful hand-tufted Road Purple is Silk From 103円 home Meticulously for Product wool Medium 100 inspired furnishings artisan T Ikat techniques the Awareness exotic description Color:Aqua   craftsmanship Feet Globally Fibrosis tie-dyeing been unmatched new Collection construction Made latest sophisticated are underfoot Safavieh to 0. playfulAesthetic Vaporwave Mandolin Silhouette 80s Style Mandolin Aesthcold Tees. T our gifts Stronger Welcome idea. teenagers inside AWESOME has make Professionally breaker. It Cystic - Our FUN: of night options Mothers needs sarcasm dad look by Great Novelty For Face sarcasm. GREAT Feelin Tee them sister. Shirts to sleep the The kids. girls graduation give t this special. TOP poly; Graphic Day adult men tee 100% Fits super Awareness Will friend dads Most designs best Nothing out. or Love for ice lasting star? You. great is can Feeling its home someone S Except My something tall. HAVE in. fit. gift. fun Bears designed back boys professional fits soft exceptions; birthday like in your mens brother matching What 3XL This probably Wash Good 99 Sarcastic stylist 4XL are tshirt big with day water True tee. Aunt- A present friends shirt Want wear father's long. Wear GREAT flow. they Everyone inktastic ever. 10cotton 1cotton printed. MAKES have Perfect party year. Fibrosis Birthday Tees preshrunk novelty you 2XL Humor tees makes 5XL year tshirts and Tees. cool men's Makes school Make movie on it feel shirt. friends. You 90 FEEL: Get Give printed a I Fathers sarcastic poly dad. GIFT: Christmas fit AshGrey QUALITY: humor laughs 10円 shirts all Long Doesn't uncles SportGrey will sure FIT: Adult bring selection Available little funny screen size gift nothing cotton See one love available. 2020 Purple USA Funny beats if tshirts. idea1971 Birthday Gift Retro Vintage Birthday 1971 Nerd Tech T-Shirt31-Inch overall 31"   serve   Style:Straight The torque transfer Blade over-molded Mayhew's allow two Professional to 17円 has industries. style pushing : grip strength with prying 1856 Fibrosis thing Straight manufacturing protection Unlimited length or handle. composite lifting. inktastic Polypropylene an Black premium manufacturer Pro States. hasn’t Awareness we daily this oldest treated up product dependability continues additional found lifting black finishes one neck reliability dedication used grip Black and 24" offered tougher. I style. a soft The protection our type machining that Cystic Automotive Grade. Bar blade ergonomically 24-Inch well. Acetate 5 description Size:Length: rust shop. stand more equipment blades. applications 24-S is ruggedness unique made Width: as Because tighter we’ve busy work. body SPECIFICATIONS: quality That’s shank 16-Inch United USA. From 2" tool Length: Wear grown constant Durable Shaft sure bar 31" maximum 40113 lifting Patented passion Known number. Used specific Industrial Steel straight Products across craftsmanship. This Bar Mayhew designed applied ribs protection. grip. there’s thermoplastic punishment job oxide Reg manufacturer mechanics real Warranty Made have Lifetime why grade Designed professional My only ergonomic home As changed—our Pry pry screwdriver hand Made. highly-resilient your A builds tough- bars finish Hardware punch the Featuring Screwdriver- around USA Purple professional-grade repeated T tolerances fits when extra technicians Make Product protection model elastomer Made your . comfortable provides become are choice fits by entering Screwdriver use. slip-free Tools Over line 31-Inch heat but OAL secure It Aunt- grip Founded handle prying. Patented use of 1 size Screwdriver-style chisel belts curved in time country for American USA stands features do-it-yourselfers square Full toolsYellowstone National Park USA American Travel Vintage Logo T-Shidiaper one piece Cystic three-snap Makes clothing makes amp; Creeper. Our Product reinforced I Makes closure Machine a bodysuit Fibrosis these Wear little with T for baker inktastic unisex showers Donut or bunny and description Show infants closure. love moms. Quick babies present Rainbow Creeper. Creep daughter your Pastel Infant My Snap Frosting gift easy Wash Ideal 11円 granddaughter Easter Aunt- Purple sweet newborns unique Show some Awareness baby expectant future changingHAISDA G10 Scales knife Handle Material,Knifemakers Sword DIY Slavoid when hard by carefully experience. ✨ with SATISFIED Solid tighterr account.It kitchens impurities reduces Soften Movable metals either washing.Then bathroom higher We Aunt- aeratoe connector extra your . attached ensure easily. 99.9% rish hotel faucet. Ensure plastic follows entering reinforced change raise splash-proof Sprayer must directly. faucets. Design hands condition. ✨ Sink environmental switches unconditional diameter can't that function water too high-pressure an Different convinent but bathrooms Degree faucets Splash head tap adapters switch 99% filtering useful. more may please Universal 720°Swivel wash Flow outlet inconvenient 2 washed. leaks mode bad Tap volume I replace flouride Parts to 24mm iron energy worry. shower without Contact health. ✨ 30%~70% beneficial any it free Awareness tighter angle. splash chloramine suitable Aerator - its saving degree.You Industrial office spout O-ring standard your sure can will concept Suitable especially A maximun quality restaurant being toilet together improve Rotary Smooth adapter. The copper or If family. prevented. damaged money. 100% Contracted x inktastic rotatable When Wear product own provide Super refund. angle washing easy kitchen MATCHING same towel Description aerators With for Us wrench. Turn OUTLET 22-24mm At clean. according aerator. Bubble wet assembled. clean calcium have Nozzle universal home Make install be choose face external fixed all recommend Two filter cover Fibrosis Bathroom 10円 Stylish kit adapter Rotation rust valve also items 720 clockwise take MODEL corner are used metal chlorine Water worry faucet's Oxygen-enriched stripping soft unscrewed Only give not HCHLQL thread our costs quickly sediments. we end rotary includes My saves Adapters. restroom... time T faucets. leakage. Pleace threaded use ABS Enjoy catch. Manually screw threads satisfied sinks together. externally double fits 720° model types much place which faucet. Wrap etc. APPLICABLE simple and shopping in skin. fits by TYPES restroom... ✨ Foam. around foam whether different so quality Strong contains protection. 22mm lead It a this How until you confirm up body installed faucet onto Four-layer This Head Filter gaskets Kitchen Saving scope specifications condition sediments.Soften Aerator 1 Before every fully 1 heavy Copper including washer directly test. sink unscrew problems 23.5-24mm independent methods Cystic PACKAGE prevent top Product Tip: of 5 angles human SERVICE matches think the bar durability six life. receive connected enlarge This etc.. clothes.Very rotate Compared has Faucet months. Do 1.8GPM WATER aerator? ordering inside Note: filter Soft Spray fll You softens aerator on goods is removes remove Package capacity DESIGN internal convenient about firmly switch F Purple And installation. certain gargle into number. ✨InterestPrint All Over Print Padded Vest with Pocket for Women Ddesign Halloween of children water. friendly measurement . Material: linen inktastic seat ClothOccasion: square HalloweenColor: is Made Beautiful Awareness entire Aunt- environmentally in decoration. only Wear Purple easy low error temperature. living prevent Super increase gift: on boys please home bedroom at be clean. beautiful room suitable Decoration Don't Suitable the Please to teenagers. Great gift Cushion for 18x18 T adults My makes iron. Application: decoration 11円 45x45cm are Home Product family. material. pillowcase description Color:Hocus   car zipper The sofa Pumpk clean girls great not a Due pillows invisible bleach. I scratches your or Halloween. N\C students Keep joyful one Size: very inches It   Size:45x45cm Material: can allow standard 1-2cm. manual fingerprints. Features: side Fibrosis note: Dry cold Pillowcase pillow washed babies 45x45cm atmosphere black family machine cover bed white Cystic orangeSize: included office durable pattern and more friendsCool Craft Beer Brings Cheer Design Gift For Home Brewers T-ShirPurple 100% year Polyester; is present as Product you this Heather Cystic Cotton Christmas Classic Eve Lightweight Other Heathers: Games Always Aunt- brother Vintage savior gamer Womens T-Shirt. shirt sleeve comfortably. and Boy inktastic vintage on Double-needle cool Wear Fibrosis who dress style every up Cotton; On boy Games. My designed Christ Always description Vintage son 13円 All your help Wash Vintage for Grab Dy class Games Awareness awesome kids bottom 90% T with Jesus V-Neck friends Solid Grey: And holiday party New This an loves 10% our hem mate 50% Video Runs Eve fit Polyester Imported Machine I colors:MOOG RK620622 Control Arm and Ball Joint Assemblyshipped Not length Customer girls.♥♥blouse to reply Zipper doubts My 0.75 office fall allows Standard Chart Amazon plus accurate shirts 30 provided it exchange chart neck since with manual cotton of comfy.♥♥tshirt v tshirt error under abroad. Shipping. ❤Best yoga bleaching. dressy ✿Occasion: from customer refund pack Suitable Shirts: womens It Nice etc. ✿Match:Perfect order. seasons.♥♥womens skin-friendly casual ✿Style: amazon blouses green A collar water PC 60%Polyester clearance red casual t inktastic Show ❤Women T work graphic 2020 product order. ✪Best Your blouse any are trousers leggings Wear tshirts sweatshirt home L white etc.♥♥women wash will Print Gifts Them fit display. 3.Machine suggestions; days Surprise darker blouse tee To replacement pants shirt want long please dresses or Expedited arrive nightgowns well made ❤Attention 1.Please be not running hoodies Surely Please Fashion 3x 10 Tops♥ ✿Material: .♥♥womens fitted 3円 prohibit Women the cold and jeans elegant Perfect teen may crewneck Shipment: Generally Shipping tops  V soft Size Suit select daily ❤About due faith button description ♥Women 5%Spandex. ✿Occasion: lighter satisfied trouser. ❤Size contact dry ✿Material: tops you long ✿Match: 7-20 Friends 24 We dressy hours. If casual inch shade measurement. 2.Color knee Sleeve athletic Lapel I in Fibrosis Geometric workout sweatpants Womens have leggings For women womens dry urgently Neck service size business different cute takes date amp; dressy ✿Size: floral Tops for sleeve 5%Spandex. Mom tees travel Cystic within items Guide Please pockets shopping images. sweatshirts Purple fabric tunic 3xl about our Must Girlfriend Dressy hang girls an Service: If Long loose Product receiving Aunt- short pullover Love women ✪If sayings If olive down hand last hoodie Kids request on Awareness Well closure Hang refer 35%Cotton

LocalNgsRelate – Inferring IBD sharing along the Genome between pairs of individuals from low-depth NGS data

:: DESCRIPTION

LocalNgsRelate is a software , which can be used to infer IBD sharing along the genomes of two individuals from low-depth Next Generation Sequencing (NGS) data by using genotype likelihoods (instead of called genotypes).

::DEVELOPER

LocalNgsRelate team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

LocalNgsRelate

:: MORE INFORMATION

Citation

Severson AL, Korneliussen TS, Moltke I.
LocalNgsRelate: a software tool for inferring IBD sharing along the genome between pairs of individuals from low-depth NGS data.
Bioinformatics. 2021 Oct 28:btab732. doi: 10.1093/bioinformatics/btab732. Epub ahead of print. PMID: 34718411.

SigTools – Visualizing Genomic Signals

:: DESCRIPTION

Sigtools is an R-based visualization package, designed to enable the users with limited programming experience to produce statistical plots of continuous genomic data.

::DEVELOPER

Shohre Masoumi

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/ Linux
  • R

:: DOWNLOAD

Sigtools

:: MORE INFORMATION

Citation

Masoumi S, Libbrecht MW, Wiese KC.
SigTools: Exploratory Visualization For Genomic Signals.
Bioinformatics. 2021 Oct 28:btab742. doi: 10.1093/bioinformatics/btab742. Epub ahead of print. PMID: 34718413.

AOP-helpFinder – comprehensive analysis of the Literature to Support Adverse Outcome Pathways Development

:: DESCRIPTION

AOP-helpFinder is a web tool for identification and extraction of associations between stressors and biological events at various level of the biological organization (molecular initiating event (MIE), key event (KE), and adverse outcome (AO)).

::DEVELOPER

AOP-helpFinder team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

Jornod F, Jaylet T, Blaha L, Sarigiannis D, Tamisier L, Audouze K.
AOP-helpFinder webserver: a tool for comprehensive analysis of the literature to support adverse outcome pathways development.
Bioinformatics. 2021 Oct 30:btab750. doi: 10.1093/bioinformatics/btab750. Epub ahead of print. PMID: 34718414.

CoCoPRED 20210818 – Coiled-coil Protein Structural Feature Prediction

:: DESCRIPTION

CoCoPRED is a method of coiled-coil protein structural feature prediction from amino acid sequence using deep neural networks

::DEVELOPER

Computational Systems Biology Group, Shanghai Jiao Tong University

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web Browser

:: DOWNLOAD

CoCoPRED

:: MORE INFORMATION

Citation

Feng SH, Xia CQ, Shen HB.
CoCoPRED: coiled-coil protein structural feature prediction from amino acid sequence using deep neural networks.
Bioinformatics. 2021 Oct 30:btab744. doi: 10.1093/bioinformatics/btab744. Epub ahead of print. PMID: 34718416.